BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB031B12SP1|AL429351
(1017 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig977 1018 0.0
3x_Contig1256 558 e-158
>3x_Contig977
Length = 3887
Score = 1018 bits (511), Expect = 0.0
Identities = 535/545 (98%), Gaps = 1/545 (0%)
Strand = Plus / Plus
Query: 473 aacctcagttagagatgatgtcttttcttggtcactgactgagtggtgtattttgtagtt 532
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 87 aacctcagttagagatgatgtcttttcttggtcactgactg-gtggtgtattttgtagtt 145
Query: 533 gcaagacatctcccacgacgtcggaatcttttctagtgatatatttccgtactcgctttc 592
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 146 gcaagacatctcccacgacgtcggaatcttttctagtgatatatttccgtactcgctttc 205
Query: 593 tcgcaggttgctcttcctcattgatctgttccatagctttcccattggtactctcggtca 652
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 tcgcaggttgctcttcctcattgatctgttccatagctttcccattggtactctcggtca 265
Query: 653 ttgctctgggccaatcaaactggctattgggactttggttggcatttgcctggacgttag 712
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 ttgctctgggccaatcaaactggctattgggactttggttggcatttgcctggacgttag 325
Query: 713 aatagtaatcctgatcttgtactctactcacttgttccagtttattatccacctgtgata 772
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 aatagtaatcctgatcttgtactctactcacttgttccagtttattatccacctgtgata 385
Query: 773 atgaaaagtccggtgaagtgattgtatttacaaccgatttacgtctgggggcaagcacgg 832
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 atgaaaagtccggtgaagtgattgtatttacaaccgatttacgtctgggggcaagcacgg 445
Query: 833 gcgawtccctagcagacgcatrggtacttttccctggcctcctcaacggtgttattaacc 892
|||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 446 gcgattccctagcagacgcagtggtacttttccctggcctcctcaacggtgttattaacc 505
Query: 893 ccgttgtcttgtcgtagmttttgtcgatgttgaaagawaatacctgccatagaggatygt 952
||||||||||||||||| |||||||||||||||||| ||||||||||||||||||| ||
Sbjct: 506 ccgttgtcttgtcgtagactttgtcgatgttgaaagataatacctgccatagaggatcgt 565
Query: 953 ccacgttattccgtatcttccagttgttctcatccaacttcaaaaaataccgattktacg 1012
||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 566 ccacgttatcccgtatcttccagttgttctcatccaacttcaaaaaataccgattgtacg 625
Query: 1013 ggctc 1017
|||||
Sbjct: 626 ggctc 630
>3x_Contig1256
Length = 6519
Score = 558 bits (280), Expect = e-158
Identities = 288/290 (99%), Gaps = 1/290 (0%)
Strand = Plus / Plus
Query: 1 gatcaatggaagcagctacttttgaactaacaactttgaatgacatttggaattccgtta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6230 gatcaatggaagcagctacttttgaactaacaactttgaatgacatttggaattccgtta 6289
Query: 61 gagtgtgatagtcgtatagccccaratccttatg-gaactttctaaagccctctcttctt 119
|||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||
Sbjct: 6290 gagtgtgatagtcgtatagccccagatccttatgagaactttctaaagccctctcttctt 6349
Query: 120 ccatgttttacacaactatttcttacagtgcaaggtttccctttattttaacatttttct 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6350 ccatgttttacacaactatttcttacagtgcaaggtttccctttattttaacatttttct 6409
Query: 180 gcaatgatgagtatggtcataggagcggaagaaacgaaacaattttgtagtcaataagaa 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6410 gcaatgatgagtatggtcataggagcggaagaaacgaaacaattttgtagtcaataagaa 6469
Query: 240 tatgattgtcggcgttttgtttataccattatataatacagtatgtatat 289
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6470 tatgattgtcggcgttttgtttataccattatataatacagtatgtatat 6519
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6981
Number of Sequences: 1807
Number of extensions: 6981
Number of successful extensions: 42
Number of sequences better than 1.0e-20: 2
length of query: 1017
length of database: 10,358,551
effective HSP length: 16
effective length of query: 1001
effective length of database: 10,329,639
effective search space: 10339968639
effective search space used: 10339968639
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.1 bits)